Build pvplugins of ZFS

The ZFS uses a portable data format of the NetCDF. The coordinates of computational mesh, instantaneous data of field variables, and all the post-processing data are saved in runtime via parallel I/O functions defined in the ZFS modules. The parallel I/O modules are written in a pnetCDF regime. The pnplugins building requires the ZFS source files, HDF5, pnetCDF, and ParaView. Unfortunately the former pvplugins earlier than the revision 9xx are not compatible with the current ZFS release which has been refined for multi-scale multi-physics simulations. So far a variety of ZFS modules are under development for the new HPC systems, e.g., JUWELS at the JSC.

OpenMPI

export PREFIX=

configure CC=gxx CXX=g++ FC=gfortran \
--enable-mpirun-prefix-by-default --prefix=$PREFIX

HDF5

../configure CC=mpicc FC=mpifort CXX=mpicxx \
--enable-parallel --enable-fortran --with-pic --prefix=

pnetCDF

export HDF5_DIR=/usr/local/hdf5

../configure CC=gcc CXX=g++ F77=gfortran F90=gfortran FC=gfortran \
MPICC=mpicc MPIF77=mpif77 MPIF90=mpif90 MPICXX=mpicxx \
CFLAGS="-I${HDF5_DIR}/include -O3 -fPIC -DPIC" \
CXXFLAGS="-I${HDF5_DIR}/include -O3 -fPIC -DPIC" \
FFLAGS="-I${HDF5_DIR}/include -O3 -fPIC" \
FCFLAGS="-I${HDF5_DIR}/include -O3 -fPIC" \
LDFLAGS="-L${HDF5_DIR}/lib64 -L$MPI_DIR/lib64" --prefix=

FFTW

export PATH=/usr/local/openmpi/bin:$PATH
export LD_LIBRARY_PATH=/usr/local/openmpi/lib64:$LD_LIBRARY_PATH

../configure --enable-float --enable-shared --enable-openmp --enable-mpi \
CC=mpicc CXX=mpic++ FC=mpicfort F77=mpifort --prefix=

NetCDF

export HDF5_DIR=/usr/local/hdf5

../configure CC=mpicc CXX=mpicxx F77=mpifort F90=mpifort FC=mpifort \
MPICC=mpicc MPIF77=mpif77 MPIF90=mpifort MPICXX=mpicxx \
CFLAGS="-I${HDF5_DIR}/include -O3 -fPIC -DPIC" \
CXXFLAGS="-I${HDF5_DIR}/include -O3 -fPIC -DPIC" \
FFLAGS="-I${HDF5_DIR}/include -O3 -fPIC" \
FCFLAGS="-I${HDF5_DIR}/include -O3 -fPIC" \
LDFLAGS="-L${HDF5_DIR}/lib64" --disable-dap --prefix=